Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Scn8aQ9WTU3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn8aQ9WTU3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn8aQ9WTU3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn8aQ9WTU3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Scn8aQ9WTU3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn8aQ9WTU3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Scn8aQ9WTU3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.21□□□□□ -0.3
Scn8aQ9WTU3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn8aQ9WTU3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Gm18584-201ENSMUST00000203098 964 ntBASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn8aQ9WTU3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Gm27516-201ENSMUST00000184237 98 ntBASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn8aQ9WTU3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Gm37259-201ENSMUST00000193903 849 ntBASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn8aQ9WTU3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms