Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AmfrQ9R049 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.81□□□□□ -0.04
AmfrQ9R049 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.81□□□□□ -0.04
AmfrQ9R049 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.81□□□□□ -0.04
AmfrQ9R049 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.81□□□□□ -0.04
AmfrQ9R049 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Gm5161-201ENSMUST00000075243 853 ntBASIC14.81□□□□□ -0.04
AmfrQ9R049 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.81□□□□□ -0.04
AmfrQ9R049 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.81□□□□□ -0.04
AmfrQ9R049 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
AmfrQ9R049 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AmfrQ9R049 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.81□□□□□ -0.04
AmfrQ9R049 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
AmfrQ9R049 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
AmfrQ9R049 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
AmfrQ9R049 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
AmfrQ9R049 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
AmfrQ9R049 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
AmfrQ9R049 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
AmfrQ9R049 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.8□□□□□ -0.04
AmfrQ9R049 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.8□□□□□ -0.04
AmfrQ9R049 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
AmfrQ9R049 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
AmfrQ9R049 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.8□□□□□ -0.04
AmfrQ9R049 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AmfrQ9R049 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Gm11918-201ENSMUST00000121660 179 ntBASIC14.79□□□□□ -0.04
AmfrQ9R049 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.79□□□□□ -0.04
AmfrQ9R049 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Gm2495-201ENSMUST00000191160 466 ntBASIC14.79□□□□□ -0.04
AmfrQ9R049 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.79□□□□□ -0.04
AmfrQ9R049 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.79□□□□□ -0.04
AmfrQ9R049 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Gm5186-201ENSMUST00000218781 920 ntBASIC14.79□□□□□ -0.04
AmfrQ9R049 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.79□□□□□ -0.04
AmfrQ9R049 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.79□□□□□ -0.04
AmfrQ9R049 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AmfrQ9R049 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
AmfrQ9R049 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.79□□□□□ -0.04
AmfrQ9R049 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.78□□□□□ -0.04
AmfrQ9R049 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AmfrQ9R049 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms