Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Gm15321-201ENSMUST00000121290 288 ntBASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Gm7730-201ENSMUST00000212486 454 ntBASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc4Q9QZD4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Gm14719-201ENSMUST00000121891 340 ntBASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Gm24447-201ENSMUST00000083977 338 ntBASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc4Q9QZD4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.33□□□□□ -0.11
Ercc4Q9QZD4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Gm26464-201ENSMUST00000157094 305 ntBASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Mir8102-201ENSMUST00000184148 139 ntBASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Gm5279-201ENSMUST00000199575 745 ntBASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc4Q9QZD4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms