Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClpxQ9JHS4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClpxQ9JHS4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Gm27989-201ENSMUST00000184721 107 ntBASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Gm46209-201ENSMUST00000217912 553 ntBASIC12.11□□□□□ -0.47
ClpxQ9JHS4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Gm16476-201ENSMUST00000221544 139 ntBASIC12.11□□□□□ -0.47
ClpxQ9JHS4 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Shd-206ENSMUST00000225145 998 ntBASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClpxQ9JHS4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpxQ9JHS4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpxQ9JHS4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms