Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1cQ9ES64 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ush1cQ9ES64 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.14■□□□□ 0.01
Ush1cQ9ES64 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ush1cQ9ES64 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ush1cQ9ES64 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Gm44335-201ENSMUST00000196879 141 ntBASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Gm44297-201ENSMUST00000198304 141 ntBASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Gm44346-201ENSMUST00000198851 141 ntBASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ush1cQ9ES64 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ush1cQ9ES64 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Gm18889-201ENSMUST00000174284 929 ntBASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ush1cQ9ES64 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms