Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.68□□□□□ -0.38
Ube4bQ9ES00 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Gm11025-201ENSMUST00000140773 466 ntBASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.68□□□□□ -0.38
Ube4bQ9ES00 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Gm20553-201ENSMUST00000204205 844 ntBASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube4bQ9ES00 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.66□□□□□ -0.38
Ube4bQ9ES00 Gm45612-201ENSMUST00000211320 160 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms