Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.16□□□□□ -0.3
Tubb3Q9ERD7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Gm8927-201ENSMUST00000181978 981 ntBASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Gm27701-201ENSMUST00000184498 110 ntBASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Gm3222-201ENSMUST00000071282 990 ntBASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tubb3Q9ERD7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Tubb3Q9ERD7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Tubb3Q9ERD7 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.15□□□□□ -0.31
Tubb3Q9ERD7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tubb3Q9ERD7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tubb3Q9ERD7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Tubb3Q9ERD7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Gm15806-201ENSMUST00000120696 955 ntBASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Mir7654-201ENSMUST00000185082 70 ntBASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tubb3Q9ERD7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms