Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hmgn3Q9DCB1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hmgn3Q9DCB1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hmgn3Q9DCB1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Gm18206-201ENSMUST00000207027 926 ntBASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgn3Q9DCB1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Gm20553-201ENSMUST00000204205 844 ntBASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Gm45453-201ENSMUST00000211758 853 ntBASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms