Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smco2Q9DA21 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smco2Q9DA21 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Smco2Q9DA21 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.9□□□□□ -0.02
Smco2Q9DA21 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.9□□□□□ -0.02
Smco2Q9DA21 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.9□□□□□ -0.02
Smco2Q9DA21 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.9□□□□□ -0.02
Smco2Q9DA21 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.9□□□□□ -0.02
Smco2Q9DA21 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smco2Q9DA21 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Grk6-205ENSMUST00000224653 2976 ntBASIC14.89□□□□□ -0.03
Smco2Q9DA21 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Gm8062-201ENSMUST00000139696 444 ntBASIC14.89□□□□□ -0.03
Smco2Q9DA21 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.89□□□□□ -0.03
Smco2Q9DA21 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.89□□□□□ -0.03
Smco2Q9DA21 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Gm29705-201ENSMUST00000212598 474 ntBASIC14.89□□□□□ -0.03
Smco2Q9DA21 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.89□□□□□ -0.03
Smco2Q9DA21 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smco2Q9DA21 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.89□□□□□ -0.03
Smco2Q9DA21 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smco2Q9DA21 Gm13392-201ENSMUST00000117708 150 ntBASIC14.88□□□□□ -0.03
Smco2Q9DA21 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms