Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gtf3c6Q9D8P7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Gtf3c6Q9D8P7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gtf3c6Q9D8P7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gtf3c6Q9D8P7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Gm22119-201ENSMUST00000175594 99 ntBASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Gm28631-201ENSMUST00000190740 334 ntBASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gtf3c6Q9D8P7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Gm38223-201ENSMUST00000194484 695 ntBASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Gm6218-201ENSMUST00000219812 628 ntBASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gtf3c6Q9D8P7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gtf3c6Q9D8P7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms