Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4cQ9D7F7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm12403-201ENSMUST00000121384 959 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm43094-201ENSMUST00000196549 921 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm7730-201ENSMUST00000212486 454 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4cQ9D7F7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Chmp4cQ9D7F7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4cQ9D7F7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms