Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Gm45784-201ENSMUST00000188360 142 ntBASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Gm36943-201ENSMUST00000194422 282 ntBASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Gm18363-201ENSMUST00000221671 730 ntBASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otud1Q9CUB6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.54□□□□□ -0.4
Otud1Q9CUB6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Gm11618-201ENSMUST00000117946 267 ntBASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Gm13123-201ENSMUST00000122173 492 ntBASIC12.53□□□□□ -0.4
Otud1Q9CUB6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otud1Q9CUB6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Otud1Q9CUB6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms