Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Mir7085-201ENSMUST00000184353 66 ntBASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Gm37973-201ENSMUST00000195767 1289 ntBASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retreg3Q9CQV4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Gm11622-201ENSMUST00000120525 691 ntBASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Gm37576-201ENSMUST00000194228 372 ntBASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 AY702102-202ENSMUST00000194651 1173 ntBASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.51□□□□□ -0.25
Retreg3Q9CQV4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Gm28455-201ENSMUST00000189105 1290 ntBASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retreg3Q9CQV4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms