Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.73□□□□□ -0.69
RTRAFQ9CQE8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Gm9385-201ENSMUST00000117563 472 ntBASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Gm11452-201ENSMUST00000122376 690 ntBASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Gm25927-201ENSMUST00000175058 117 ntBASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Gm27628-201ENSMUST00000184911 107 ntBASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 AA619741-201ENSMUST00000195095 646 ntBASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.72□□□□□ -0.69
RTRAFQ9CQE8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Gm24589-201ENSMUST00000116692 94 ntBASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Ank2-226ENSMUST00000189368 339 ntBASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Gm6443-201ENSMUST00000203599 874 ntBASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTRAFQ9CQE8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms