Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Gm10013-201ENSMUST00000106074 672 ntBASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Gm13168-201ENSMUST00000121771 632 ntBASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Gm6345-202ENSMUST00000180900 204 ntBASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Gm5587-201ENSMUST00000206270 674 ntBASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chchd1Q9CQA6 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 AC108846.1-201ENSMUST00000214531 513 ntBASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Chchd1Q9CQA6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.83
Chchd1Q9CQA6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Chchd1Q9CQA6 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms