Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Gm9368-201ENSMUST00000219348 831 ntBASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Prpf8Q99PV0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm22323-201ENSMUST00000103832 109 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm38266-201ENSMUST00000194931 421 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm11637-201ENSMUST00000120601 592 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Prpf8Q99PV0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Prpf8Q99PV0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Prpf8Q99PV0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms