Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.98□□□□□ -0.33
Trim8Q99PJ2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Gm27430-201ENSMUST00000184585 107 ntBASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Gm44333-201ENSMUST00000197168 107 ntBASIC12.98□□□□□ -0.33
Trim8Q99PJ2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim8Q99PJ2 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Gm27618-201ENSMUST00000183671 60 ntBASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.97□□□□□ -0.33
Trim8Q99PJ2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim8Q99PJ2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Gm4804-201ENSMUST00000182234 999 ntBASIC12.96□□□□□ -0.33
Trim8Q99PJ2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim8Q99PJ2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms