Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Gm5455-201ENSMUST00000058710 715 ntBASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdh15Q99PJ1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh15Q99PJ1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Mir1956-201ENSMUST00000157748 65 ntBASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Gm44980-201ENSMUST00000205826 314 ntBASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Gm13047-201ENSMUST00000117116 815 ntBASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh15Q99PJ1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh15Q99PJ1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh15Q99PJ1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh15Q99PJ1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.55□□□□□ -0.08
Pcdh15Q99PJ1 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh15Q99PJ1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh15Q99PJ1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms