Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.23■□□□□ 0.19
RtcbQ99LF4 CU062626.3-201ENSMUST00000225522 1411 ntBASIC16.23■□□□□ 0.19
RtcbQ99LF4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Gm12058-201ENSMUST00000118614 437 ntBASIC16.23■□□□□ 0.19
RtcbQ99LF4 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.23■□□□□ 0.19
RtcbQ99LF4 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.23■□□□□ 0.19
RtcbQ99LF4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC16.23■□□□□ 0.19
RtcbQ99LF4 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.23■□□□□ 0.19
RtcbQ99LF4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.22■□□□□ 0.19
RtcbQ99LF4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Gm23200-201ENSMUST00000104379 132 ntBASIC16.22■□□□□ 0.19
RtcbQ99LF4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Gm8908-201ENSMUST00000121633 1024 ntBASIC16.22■□□□□ 0.19
RtcbQ99LF4 Gm25043-201ENSMUST00000158604 212 ntBASIC16.22■□□□□ 0.19
RtcbQ99LF4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.22■□□□□ 0.19
RtcbQ99LF4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.22■□□□□ 0.19
RtcbQ99LF4 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.22■□□□□ 0.19
RtcbQ99LF4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.22■□□□□ 0.19
RtcbQ99LF4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
RtcbQ99LF4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.21■□□□□ 0.19
RtcbQ99LF4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.21■□□□□ 0.19
RtcbQ99LF4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.21■□□□□ 0.19
RtcbQ99LF4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC16.21■□□□□ 0.19
RtcbQ99LF4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.21■□□□□ 0.19
RtcbQ99LF4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RtcbQ99LF4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RtcbQ99LF4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RtcbQ99LF4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RtcbQ99LF4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RtcbQ99LF4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.21■□□□□ 0.18
RtcbQ99LF4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RtcbQ99LF4 Gm13996-201ENSMUST00000118456 430 ntBASIC16.2■□□□□ 0.18
RtcbQ99LF4 Gm20426-201ENSMUST00000173657 440 ntBASIC16.2■□□□□ 0.18
RtcbQ99LF4 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.2■□□□□ 0.18
RtcbQ99LF4 Gm38092-201ENSMUST00000195600 653 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms