Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Gm12485-201ENSMUST00000119641 291 ntBASIC12.07□□□□□ -0.48
Lims1Q99JW4 Gm26464-201ENSMUST00000157094 305 ntBASIC12.07□□□□□ -0.48
Lims1Q99JW4 Gm21854-201ENSMUST00000179901 471 ntBASIC12.07□□□□□ -0.48
Lims1Q99JW4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Gm9522-201ENSMUST00000182394 926 ntBASIC12.07□□□□□ -0.48
Lims1Q99JW4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Gm43094-201ENSMUST00000196549 921 ntBASIC12.07□□□□□ -0.48
Lims1Q99JW4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Lims1Q99JW4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.07□□□□□ -0.48
Lims1Q99JW4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.06□□□□□ -0.48
Lims1Q99JW4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Gm15376-201ENSMUST00000122258 783 ntBASIC12.06□□□□□ -0.48
Lims1Q99JW4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Gm29608-201ENSMUST00000190444 463 ntBASIC12.06□□□□□ -0.48
Lims1Q99JW4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.06□□□□□ -0.48
Lims1Q99JW4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.06□□□□□ -0.48
Lims1Q99JW4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lims1Q99JW4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.05□□□□□ -0.48
Lims1Q99JW4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.05□□□□□ -0.48
Lims1Q99JW4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lims1Q99JW4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms