Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm14723-201ENSMUST00000118686 215 ntBASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.56■□□□□ 0.08
Col20a1Q923P0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm29396-201ENSMUST00000185659 716 ntBASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm19931-201ENSMUST00000198920 368 ntBASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm18584-201ENSMUST00000203098 964 ntBASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm3961-201ENSMUST00000204425 994 ntBASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm18935-201ENSMUST00000212692 664 ntBASIC15.56■□□□□ 0.08
Col20a1Q923P0 Gm5781-201ENSMUST00000219792 443 ntBASIC15.56■□□□□ 0.08
Col20a1Q923P0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col20a1Q923P0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Gm13786-201ENSMUST00000122371 333 ntBASIC15.55■□□□□ 0.08
Col20a1Q923P0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.55■□□□□ 0.08
Col20a1Q923P0 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.55■□□□□ 0.08
Col20a1Q923P0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.55■□□□□ 0.08
Col20a1Q923P0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Col20a1Q923P0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Gm27516-201ENSMUST00000184237 98 ntBASIC15.54■□□□□ 0.08
Col20a1Q923P0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col20a1Q923P0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.54■□□□□ 0.08
Col20a1Q923P0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Col20a1Q923P0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col20a1Q923P0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Col20a1Q923P0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col20a1Q923P0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Col20a1Q923P0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col20a1Q923P0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col20a1Q923P0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col20a1Q923P0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Col20a1Q923P0 Gm24548-201ENSMUST00000158650 108 ntBASIC15.53■□□□□ 0.08
Col20a1Q923P0 Gm22121-201ENSMUST00000175148 54 ntBASIC15.53■□□□□ 0.08
Col20a1Q923P0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms