Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b3Q921M3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b3Q921M3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b3Q921M3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b3Q921M3 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.81■□□□□ 0.12
Sf3b3Q921M3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b3Q921M3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.81■□□□□ 0.12
Sf3b3Q921M3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Gm11930-201ENSMUST00000117788 190 ntBASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Gm16505-201ENSMUST00000179981 232 ntBASIC15.8■□□□□ 0.12
Sf3b3Q921M3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Gm8885-201ENSMUST00000189382 598 ntBASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Gm22058-201ENSMUST00000083393 310 ntBASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b3Q921M3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.79■□□□□ 0.12
Sf3b3Q921M3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Gm12058-201ENSMUST00000118614 437 ntBASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Gm44967-201ENSMUST00000207047 631 ntBASIC15.79■□□□□ 0.12
Sf3b3Q921M3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sf3b3Q921M3 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.78■□□□□ 0.12
Sf3b3Q921M3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3b3Q921M3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3b3Q921M3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3b3Q921M3 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.78■□□□□ 0.12
Sf3b3Q921M3 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.78■□□□□ 0.12
Sf3b3Q921M3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms