Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Gm8810-201ENSMUST00000172895 754 ntBASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Gm5745-201ENSMUST00000183748 313 ntBASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdha9Q91Y11 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Gm27847-201ENSMUST00000183711 107 ntBASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Gm27375-201ENSMUST00000183799 107 ntBASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Gm27839-201ENSMUST00000184242 106 ntBASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Gm37922-201ENSMUST00000195596 455 ntBASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdha9Q91Y11 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms