Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Mir7684-201ENSMUST00000183858 60 ntBASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb4Q91XZ6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms