Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Gm5354-201ENSMUST00000182417 973 ntBASIC11.09□□□□□ -0.63
H1fooQ8VIK3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.09□□□□□ -0.63
H1fooQ8VIK3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Gm7730-201ENSMUST00000212486 454 ntBASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H1fooQ8VIK3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
H1fooQ8VIK3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.63
H1fooQ8VIK3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
H1fooQ8VIK3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm29608-201ENSMUST00000190444 463 ntBASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm45841-201ENSMUST00000207700 164 ntBASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
H1fooQ8VIK3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
H1fooQ8VIK3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H1fooQ8VIK3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms