Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Q8VDP2 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.88□□□□□ -0.35
Q8VDP2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Q8VDP2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Q8VDP2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.88□□□□□ -0.35
Q8VDP2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.88□□□□□ -0.35
Q8VDP2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.88□□□□□ -0.35
Q8VDP2 Gm37935-201ENSMUST00000192012 982 ntBASIC12.88□□□□□ -0.35
Q8VDP2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.88□□□□□ -0.35
Q8VDP2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.88□□□□□ -0.35
Q8VDP2 AV026068-213ENSMUST00000223675 1171 ntBASIC12.88□□□□□ -0.35
Q8VDP2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Q8VDP2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Q8VDP2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Q8VDP2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Q8VDP2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.88□□□□□ -0.35
Q8VDP2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q8VDP2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Q8VDP2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Q8VDP2 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.87□□□□□ -0.35
Q8VDP2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Q8VDP2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.87□□□□□ -0.35
Q8VDP2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.87□□□□□ -0.35
Q8VDP2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.87□□□□□ -0.35
Q8VDP2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.87□□□□□ -0.35
Q8VDP2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.87□□□□□ -0.35
Q8VDP2 Gm6089-201ENSMUST00000197666 938 ntBASIC12.87□□□□□ -0.35
Q8VDP2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.87□□□□□ -0.35
Q8VDP2 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.87□□□□□ -0.35
Q8VDP2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.87□□□□□ -0.35
Q8VDP2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Q8VDP2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Q8VDP2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q8VDP2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Q8VDP2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.86□□□□□ -0.35
Q8VDP2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.86□□□□□ -0.35
Q8VDP2 Gm6550-201ENSMUST00000187574 993 ntBASIC12.86□□□□□ -0.35
Q8VDP2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.86□□□□□ -0.35
Q8VDP2 Gm5364-201ENSMUST00000216789 889 ntBASIC12.86□□□□□ -0.35
Q8VDP2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q8VDP2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Q8VDP2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms