Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Gm8213-201ENSMUST00000118191 441 ntBASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Gm10156-201ENSMUST00000122364 462 ntBASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Gm8062-201ENSMUST00000139696 444 ntBASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Gm43818-201ENSMUST00000200605 466 ntBASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ndc1Q8VCB1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ndc1Q8VCB1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm12203-201ENSMUST00000118235 598 ntBASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm12384-201ENSMUST00000119228 919 ntBASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm12209-201ENSMUST00000120089 596 ntBASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm16177-201ENSMUST00000120728 718 ntBASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm27331-201ENSMUST00000183705 60 ntBASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm37424-201ENSMUST00000191727 561 ntBASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms