Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Gm10012-201ENSMUST00000078252 192 ntBASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Gm5356-201ENSMUST00000093326 615 ntBASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpap2Q8VC34 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Gm8213-201ENSMUST00000118191 441 ntBASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Gm10156-201ENSMUST00000122364 462 ntBASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Proscos-202ENSMUST00000178990 666 ntBASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Gm8598-201ENSMUST00000221184 836 ntBASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpap2Q8VC34 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpap2Q8VC34 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms