Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 BC043934-202ENSMUST00000185694 2356 ntBASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Mzt1-203ENSMUST00000227948 952 ntBASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc9Q8VC31 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Gm12350-201ENSMUST00000121208 462 ntBASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Gm18733-201ENSMUST00000173950 856 ntBASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Gm2651-201ENSMUST00000203560 838 ntBASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Gm45167-201ENSMUST00000208007 322 ntBASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Gm42498-201ENSMUST00000199981 1372 ntBASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Ccdc9Q8VC31 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Gm44124-201ENSMUST00000204159 472 ntBASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms