Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Gm11745-201ENSMUST00000121669 448 ntBASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Gm6916-202ENSMUST00000205523 195 ntBASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.88□□□□□ -0.51
Ccdc58Q8R3Q6 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Gm18766-201ENSMUST00000189811 808 ntBASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Gm16476-201ENSMUST00000221544 139 ntBASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Dupd1-202ENSMUST00000224735 548 ntBASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc58Q8R3Q6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms