Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ddx54Q8K4L0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Gm13492-201ENSMUST00000119772 665 ntBASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Gm37201-201ENSMUST00000191845 523 ntBASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Gm4607-201ENSMUST00000206649 577 ntBASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ddx54Q8K4L0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Gm12029-201ENSMUST00000120073 832 ntBASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Gm11675-201ENSMUST00000121873 832 ntBASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Gm19353-201ENSMUST00000184561 445 ntBASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Gm37666-201ENSMUST00000194110 866 ntBASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Gm7207-201ENSMUST00000211575 1067 ntBASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ddx54Q8K4L0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms