Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Mir1894-201ENSMUST00000122802 81 ntBASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Gm27892-201ENSMUST00000185017 106 ntBASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn1Q8K0T0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn1Q8K0T0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rtn1Q8K0T0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rtn1Q8K0T0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn1Q8K0T0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Gm16202-201ENSMUST00000117532 544 ntBASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn1Q8K0T0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Proscos-202ENSMUST00000178990 666 ntBASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Gm44069-201ENSMUST00000204898 506 ntBASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn1Q8K0T0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms