Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CopaQ8CIE6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CopaQ8CIE6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
CopaQ8CIE6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CopaQ8CIE6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CopaQ8CIE6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CopaQ8CIE6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Gm4984-201ENSMUST00000115987 360 ntBASIC13.52□□□□□ -0.25
CopaQ8CIE6 Gm13689-201ENSMUST00000119360 685 ntBASIC13.52□□□□□ -0.25
CopaQ8CIE6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Gm27839-201ENSMUST00000184242 106 ntBASIC13.52□□□□□ -0.25
CopaQ8CIE6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Gm29741-201ENSMUST00000192667 421 ntBASIC13.52□□□□□ -0.25
CopaQ8CIE6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Gm17794-201ENSMUST00000220252 955 ntBASIC13.52□□□□□ -0.25
CopaQ8CIE6 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.52□□□□□ -0.25
CopaQ8CIE6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.52□□□□□ -0.25
CopaQ8CIE6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.52□□□□□ -0.25
CopaQ8CIE6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CopaQ8CIE6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.51□□□□□ -0.25
CopaQ8CIE6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.51□□□□□ -0.25
CopaQ8CIE6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CopaQ8CIE6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.51□□□□□ -0.25
CopaQ8CIE6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Gm11425-201ENSMUST00000119608 498 ntBASIC13.51□□□□□ -0.25
CopaQ8CIE6 Gm12485-201ENSMUST00000119641 291 ntBASIC13.51□□□□□ -0.25
CopaQ8CIE6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.51□□□□□ -0.25
CopaQ8CIE6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.51□□□□□ -0.25
CopaQ8CIE6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.51□□□□□ -0.25
CopaQ8CIE6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.51□□□□□ -0.25
CopaQ8CIE6 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.51□□□□□ -0.25
CopaQ8CIE6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Gm9396-201ENSMUST00000076703 567 ntBASIC13.51□□□□□ -0.25
CopaQ8CIE6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CopaQ8CIE6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CopaQ8CIE6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CopaQ8CIE6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CopaQ8CIE6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CopaQ8CIE6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.5□□□□□ -0.25
CopaQ8CIE6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CopaQ8CIE6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CopaQ8CIE6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CopaQ8CIE6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.5□□□□□ -0.25
CopaQ8CIE6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CopaQ8CIE6 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.5□□□□□ -0.25
CopaQ8CIE6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CopaQ8CIE6 Gm12928-201ENSMUST00000117115 573 ntBASIC13.5□□□□□ -0.25
CopaQ8CIE6 Gm12390-201ENSMUST00000117897 397 ntBASIC13.5□□□□□ -0.25
CopaQ8CIE6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.5□□□□□ -0.25
CopaQ8CIE6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.5□□□□□ -0.25
CopaQ8CIE6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.5□□□□□ -0.25
CopaQ8CIE6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CopaQ8CIE6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms