Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdlim5Q8CI51 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Gm20949-201ENSMUST00000206478 952 ntBASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim5Q8CI51 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim5Q8CI51 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim5Q8CI51 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms