Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc28bQ8CEG5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Mir1895-201ENSMUST00000122615 79 ntBASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Gm4804-201ENSMUST00000182234 999 ntBASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc28bQ8CEG5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Gm24543-201ENSMUST00000103867 82 ntBASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Gm15770-201ENSMUST00000117498 584 ntBASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Gm14494-201ENSMUST00000118786 435 ntBASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Gm13365-201ENSMUST00000121188 973 ntBASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Gm45841-201ENSMUST00000207700 164 ntBASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc28bQ8CEG5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc28bQ8CEG5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms