Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Gm36943-201ENSMUST00000194422 282 ntBASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Gm3756-201ENSMUST00000169182 1355 ntBASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Gm28386-201ENSMUST00000189147 1849 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Gm6023-201ENSMUST00000118217 606 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Gm24548-201ENSMUST00000158650 108 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Gm7584-201ENSMUST00000175829 940 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Gm43758-201ENSMUST00000199500 367 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Gm6334-201ENSMUST00000207083 228 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Gm9257-201ENSMUST00000221254 232 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph6aQ8CDR2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Gm38157-201ENSMUST00000194178 1698 ntBASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Gm13342-201ENSMUST00000121055 207 ntBASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Gm14126-201ENSMUST00000122345 395 ntBASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Gm38266-201ENSMUST00000194931 421 ntBASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Gm37720-201ENSMUST00000195497 1241 ntBASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Gm43822-201ENSMUST00000200285 476 ntBASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph6aQ8CDR2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rsph6aQ8CDR2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.2■□□□□ 0.34
Rsph6aQ8CDR2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.2■□□□□ 0.34
Rsph6aQ8CDR2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph6aQ8CDR2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph6aQ8CDR2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph6aQ8CDR2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph6aQ8CDR2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph6aQ8CDR2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.2■□□□□ 0.34
Rsph6aQ8CDR2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms