Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa4Q8CA71 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Gm5187-201ENSMUST00000117317 991 ntBASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Gm11637-201ENSMUST00000120601 592 ntBASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Gm37042-201ENSMUST00000193816 581 ntBASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Gm10268-201ENSMUST00000085340 555 ntBASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.29■□□□□ 0.04
Shisa4Q8CA71 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Gm26461-201ENSMUST00000175064 290 ntBASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Gm22121-201ENSMUST00000175148 54 ntBASIC15.28■□□□□ 0.04
Shisa4Q8CA71 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa4Q8CA71 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Gm12384-201ENSMUST00000119228 919 ntBASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Gm2231-201ENSMUST00000125661 612 ntBASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Gm27243-201ENSMUST00000183964 521 ntBASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Snora73a-201ENSMUST00000082453 205 ntBASIC15.27■□□□□ 0.04
Shisa4Q8CA71 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Shisa4Q8CA71 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Shisa4Q8CA71 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms