Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Gm8602-201ENSMUST00000184045 607 ntBASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Gm27486-201ENSMUST00000184923 80 ntBASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc60Q8C4J0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Gm8213-201ENSMUST00000118191 441 ntBASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Gm16372-201ENSMUST00000073088 450 ntBASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc60Q8C4J0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Gm11978-201ENSMUST00000122315 466 ntBASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Gm7561-201ENSMUST00000211203 886 ntBASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms