Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trub1Q8C0D0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Gm27701-201ENSMUST00000184498 110 ntBASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.64□□□□□ -0.23
Trub1Q8C0D0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trub1Q8C0D0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Gm14350-201ENSMUST00000116642 640 ntBASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Gm12928-201ENSMUST00000117115 573 ntBASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Gm8463-201ENSMUST00000208573 613 ntBASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Gm18473-201ENSMUST00000220543 868 ntBASIC13.63□□□□□ -0.23
Trub1Q8C0D0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Gm6180-201ENSMUST00000065243 498 ntBASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trub1Q8C0D0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Gm14928-201ENSMUST00000120198 477 ntBASIC13.62□□□□□ -0.23
Trub1Q8C0D0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Gm12091-201ENSMUST00000146791 830 ntBASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Gm6152-201ENSMUST00000151704 340 ntBASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Gm28911-201ENSMUST00000188837 117 ntBASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.62□□□□□ -0.23
Trub1Q8C0D0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trub1Q8C0D0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms