Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Gm43094-201ENSMUST00000196549 921 ntBASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Gm43433-201ENSMUST00000196573 481 ntBASIC11.78□□□□□ -0.52
Ube3dQ8BX13 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube3dQ8BX13 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ube3dQ8BX13 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ube3dQ8BX13 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ube3dQ8BX13 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.77□□□□□ -0.52
Ube3dQ8BX13 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ube3dQ8BX13 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ube3dQ8BX13 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ube3dQ8BX13 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ube3dQ8BX13 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ube3dQ8BX13 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ube3dQ8BX13 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Gm11524-201ENSMUST00000119349 807 ntBASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Gm9002-201ENSMUST00000178437 499 ntBASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Gm8602-201ENSMUST00000184045 607 ntBASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Gm27772-201ENSMUST00000184900 187 ntBASIC11.77□□□□□ -0.53
Ube3dQ8BX13 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.77□□□□□ -0.53
Ube3dQ8BX13 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Gm19078-201ENSMUST00000206311 727 ntBASIC11.77□□□□□ -0.53
Ube3dQ8BX13 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.77□□□□□ -0.53
Ube3dQ8BX13 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ube3dQ8BX13 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms