Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.48□□□□□ -0.57
Srrm4Q8BKA3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm6244-201ENSMUST00000178732 841 ntBASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm27892-201ENSMUST00000185017 106 ntBASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm7287-201ENSMUST00000205267 602 ntBASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Srrm4Q8BKA3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Rubie-203ENSMUST00000227803 2430 ntBASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Mir1894-201ENSMUST00000122802 81 ntBASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.46□□□□□ -0.57
Srrm4Q8BKA3 Gm5035-201ENSMUST00000215581 927 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms