Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Gm14057-201ENSMUST00000120631 482 ntBASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Gm9797-201ENSMUST00000052902 613 ntBASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Gm15321-201ENSMUST00000121290 288 ntBASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Syt7-204ENSMUST00000223586 1344 ntBASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc40Q8BI79 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.83□□□□□ -0.19
Ccdc40Q8BI79 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc40Q8BI79 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc40Q8BI79 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc40Q8BI79 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc40Q8BI79 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc40Q8BI79 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Gm20949-201ENSMUST00000206478 952 ntBASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc40Q8BI79 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms