Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf38Q8BI21 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Gm17795-201ENSMUST00000214505 757 ntBASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf38Q8BI21 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Mir7221-201ENSMUST00000184009 72 ntBASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Gm17330-201ENSMUST00000221047 165 ntBASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rnf38Q8BI21 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms