Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn3Q8BHH8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn3Q8BHH8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Gm15371-201ENSMUST00000117057 784 ntBASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Gm12859-201ENSMUST00000117834 427 ntBASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.44□□□□□ -0.42
Clrn3Q8BHH8 Gm15823-201ENSMUST00000064305 670 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms