Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.07□□□□□ -0.32
Ubp1Q811S7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Gm11478-201ENSMUST00000117851 599 ntBASIC13.07□□□□□ -0.32
Ubp1Q811S7 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.07□□□□□ -0.32
Ubp1Q811S7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Gm8463-201ENSMUST00000208573 613 ntBASIC13.07□□□□□ -0.32
Ubp1Q811S7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.07□□□□□ -0.32
Ubp1Q811S7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.07□□□□□ -0.32
Ubp1Q811S7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubp1Q811S7 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.06□□□□□ -0.32
Ubp1Q811S7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.06□□□□□ -0.32
Ubp1Q811S7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.06□□□□□ -0.32
Ubp1Q811S7 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.06□□□□□ -0.32
Ubp1Q811S7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.06□□□□□ -0.32
Ubp1Q811S7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.06□□□□□ -0.32
Ubp1Q811S7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ubp1Q811S7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ubp1Q811S7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.06□□□□□ -0.32
Ubp1Q811S7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.05□□□□□ -0.32
Ubp1Q811S7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Gm15806-201ENSMUST00000120696 955 ntBASIC13.05□□□□□ -0.32
Ubp1Q811S7 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Gm38671-201ENSMUST00000200573 130 ntBASIC13.05□□□□□ -0.32
Ubp1Q811S7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Itm2b-204ENSMUST00000228637 783 ntBASIC13.05□□□□□ -0.32
Ubp1Q811S7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Gm5356-201ENSMUST00000093326 615 ntBASIC13.05□□□□□ -0.32
Ubp1Q811S7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubp1Q811S7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms