Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.75■□□□□ 0.27
Shank2Q80Z38 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank2Q80Z38 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Gm15711-201ENSMUST00000118889 535 ntBASIC16.74■□□□□ 0.27
Shank2Q80Z38 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC16.74■□□□□ 0.27
Shank2Q80Z38 Gm14999-201ENSMUST00000121039 624 ntBASIC16.74■□□□□ 0.27
Shank2Q80Z38 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Gm19287-201ENSMUST00000203190 358 ntBASIC16.74■□□□□ 0.27
Shank2Q80Z38 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC16.74■□□□□ 0.27
Shank2Q80Z38 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC16.74■□□□□ 0.27
Shank2Q80Z38 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.74■□□□□ 0.27
Shank2Q80Z38 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Shank2Q80Z38 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank2Q80Z38 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Shank2Q80Z38 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Gm12291-201ENSMUST00000121627 311 ntBASIC16.73■□□□□ 0.27
Shank2Q80Z38 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Gm4607-201ENSMUST00000206649 577 ntBASIC16.73■□□□□ 0.27
Shank2Q80Z38 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC16.73■□□□□ 0.27
Shank2Q80Z38 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Rmrp-201ENSMUST00000157463 271 ntBASIC16.73■□□□□ 0.27
Shank2Q80Z38 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.73■□□□□ 0.27
Shank2Q80Z38 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Gm27627-201ENSMUST00000183644 150 ntBASIC16.73■□□□□ 0.27
Shank2Q80Z38 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC16.73■□□□□ 0.27
Shank2Q80Z38 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.73■□□□□ 0.27
Shank2Q80Z38 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank2Q80Z38 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms