Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Grk6-205ENSMUST00000224653 2976 ntBASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Gm27341-201ENSMUST00000183570 106 ntBASIC15.26■□□□□ 0.03
Prpf40bQ80W14 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Rps4l-202ENSMUST00000204242 789 ntBASIC15.26■□□□□ 0.03
Prpf40bQ80W14 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.26■□□□□ 0.03
Prpf40bQ80W14 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf40bQ80W14 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Gm13369-201ENSMUST00000119442 987 ntBASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Gm25927-201ENSMUST00000175058 117 ntBASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf40bQ80W14 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Gm25261-201ENSMUST00000157416 134 ntBASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms