Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm13392-201ENSMUST00000117708 150 ntBASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Gm2231-201ENSMUST00000125661 612 ntBASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Gm10146-201ENSMUST00000072739 309 ntBASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Gm10268-201ENSMUST00000085340 555 ntBASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh19Q80TF3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Gm27572-201ENSMUST00000183702 255 ntBASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Gm27682-201ENSMUST00000183930 110 ntBASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh19Q80TF3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Gm13123-201ENSMUST00000122173 492 ntBASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Gm27514-201ENSMUST00000183692 110 ntBASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh19Q80TF3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Pcdh19Q80TF3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh19Q80TF3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh19Q80TF3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh19Q80TF3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.96□□□□□ -0.34
Pcdh19Q80TF3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh19Q80TF3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms