Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Gm8213-201ENSMUST00000118191 441 ntBASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Gm14381-201ENSMUST00000122105 414 ntBASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Gm8584-201ENSMUST00000171982 758 ntBASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Gm43133-201ENSMUST00000197472 463 ntBASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Gm29787-201ENSMUST00000222129 849 ntBASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Gm11803-201ENSMUST00000119966 444 ntBASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Gm26464-201ENSMUST00000157094 305 ntBASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Gm27331-201ENSMUST00000183705 60 ntBASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Prpf38bQ80SY5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Gm11628-201ENSMUST00000117568 171 ntBASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Gm1335-201ENSMUST00000121653 386 ntBASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Gm29705-201ENSMUST00000212598 474 ntBASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms