Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.79□□□□□ -0.68
Vma21Q78T54 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.78□□□□□ -0.68
Vma21Q78T54 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm15240-201ENSMUST00000118156 720 ntBASIC10.78□□□□□ -0.68
Vma21Q78T54 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm13453-201ENSMUST00000118708 357 ntBASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm27618-201ENSMUST00000183671 60 ntBASIC10.78□□□□□ -0.68
Vma21Q78T54 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.78□□□□□ -0.68
Vma21Q78T54 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.78□□□□□ -0.68
Vma21Q78T54 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Gm17330-201ENSMUST00000221047 165 ntBASIC10.78□□□□□ -0.68
Vma21Q78T54 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.78□□□□□ -0.68
Vma21Q78T54 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.78□□□□□ -0.68
Vma21Q78T54 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Vma21Q78T54 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Vma21Q78T54 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Vma21Q78T54 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Vma21Q78T54 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Vma21Q78T54 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.77□□□□□ -0.69
Vma21Q78T54 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vma21Q78T54 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vma21Q78T54 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vma21Q78T54 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Vma21Q78T54 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.77□□□□□ -0.69
Vma21Q78T54 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Vma21Q78T54 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.77□□□□□ -0.69
Vma21Q78T54 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Vma21Q78T54 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.77□□□□□ -0.69
Vma21Q78T54 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms